Principal molecular markers
DOI:
https://doi.org/10.33448/rsd-v10i15.23633Keywords:
AFLP; RFLP; SSR.Abstract
Molecular markers are molecular phenotypes originating from any expressed or unexpressed segments of DNA that come from genetic inheritance and lend themselves to the differentiation of one or more individuals. It can be classified into two groups: the first, markers are obtained by hybridization and the second, markers are obtained by DNA amplification. Among those identified by hybridization are the main RFLP markers and minisatellite markers, while for the markers by amplification are the most used RAPD, SCAR, STS, AFLP and SSR or microsatellites. In view of this, the present study aimed to develop a literature review on the main molecular markers and their respective information. The work seeks to synthesize the knowledge about the main molecular markers, because from them, it is possible to make the detection and analysis of genetic polymorphisms that are of interest in several areas, because they can help understand the molecular basis of various biological aspects. In view of this, the study by means of literature review becomes useful, showing how important molecular markers have been, because they can detect and analyze the genetic polymorphisms present in several species. And from the survey of journals in the last five years, it shows that RFLPs markers have the largest number of studies done, followed by SSRs and AFLPs markers. New studies can be made taking into consideration more years for the survey, obtaining more concrete and detailed results.
References
Alexander, L. M., Kirigwi, F. M., Fritz, A. K., & Fellers, J. P. (2012). Mapping and quantitative trait loci analysis of drought tolerance in a spring wheat population using amplified fragment length polymorphism and diversity array technology markers. Crop Science, 52(1), 253-261.
Andrade, F. A. D., Gonçalves, L. S. A., Miglioranza, É., Ruas, C. D. F., Ruas, P. M., & Takahashi, L. S. A. (2016). Análise de AFLP na diversidade genética em acessos de feijão-de-vagem de hábito determinado e indeterminado. Acta Scientiarum. Agronomy, 38(1), 29-34.
Aparecido, M. M., Missiaggia, A. A., & Morais, F. V. (2016). Avaliação da diversidade genética em uma população de Eucalyptus spp. Utilizando Marcador Microssatélite (SSR). Revista Univap, 22(40), 214.
Bentes, J. L. D. S., Sousa, F. M. G., Lopes, M. T. G., Valente, M. S. F., Almeida, F. V., & Demosthenes, L. C. R. (2018). Variabilidade genética de Corynespora cassiicola isolados do Amazonas, Brasil. Arquivos do Instituto Biológico, 85.
Brown, T. A. (2001). Southern Blotting and Related DNA Detection Techniques. Encyclopedia of Life Sceince.
Carvalho, J. A., Hagen, F., Fisher, M. C., de Camargo, Z. P., & Rodrigues, A. M. (2020). Genome-wide mapping using new AFLP markers to explore intraspecific variation among pathogenic Sporothrix species. PLoS neglected tropical diseases, 14(7), e0008330.
Cavers, S., Degen, B., Caron, H., Lemes, M. R., Margis, R., Salgueiro, F., & Lowe, A. J. (2005). Optimal sampling strategy for estimation of spatial genetic structure in tree populations. Heredity, 95(4), 281- 289.
Chies, S. T. T., Burchardt, P., Alves, E. M. S., Essi, L. & Santos, E. K. (2014). O estudo da biodiversidade e evolução vegetal através de marcadores de DNA e citogenética: exemplos em Iridaceae e Poaceae. Ciência e Natura, 36, 279-293.
Ferreira, M. E., Fernández, J. N., & Grattapaglia, D. (1998). Introducción al uso de marcadores moleculares en el análisis genético. Federal District, Brazil: Embrapa.
Frikha, R., Bouayed, N., Ben Rhouma, B., Keskes, L., & Rebai, T. (2018). A duplex polymerase chain reaction‐restriction fragment length polymorphism for rapid screening of methylenetetrahydrofolate reductase gene variants: Genotyping in acute leukemia. Journal of clinical laboratory analysis, 32(1), e22198.
Goldstein, D. B., & Schlötterer, C. (1999) Microsattelites: Evolution and Applications. Oxford University Press.
Grover, A., & Sharma, P. C. (2016). Development and use of molecular markers: past and presente. Critical Reviews in Biotechnology, (36) 290-302.
Guzmán, M. D. J. B., Rodríguez, L. F. G., Mariscal, K. D. L. P. G., Suárez, P. A. P., & Santos, M. O. (2017). Identificación de híbridos de Citrus aurantifolia X Citrus limon utilizando marcadores de Secuencias Simples Repetidas (SSR). Revista Mexicana de Ciencias Agrícolas, 8(6), 1397-1408.
Hawerroth, M. C., Brancher, T. L., & Kvitschal, M. V. (2018). Dissimilaridade entre genótipos elite de macieira da Epagri com base na caracterização fenotípica e molecular. Agropecuária Catarinense, 31(3), 67-72.
Konieczny, A., & Ausubel, F. M. (1993). A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers. Plant Journal, (4) 403- 410.
Mondini, L., Noorani, A., & Pagnotta, M. A. (2009). Assessing plantgenetic diversity by molecular tools. Diversity, 1(1), 19-35.
Morgante, M. Hanafey, M. & Powell, W. (2002) Microsatellites are preferentialy associated with nonrepetitive DNA in plant genomes. Nature Genetics, 30, 194-200.
Nishikaku, K., Ishikura, R., Ohnuki, N., Polat, M., Aida, Y., Murakami, S., & Kobayashi, T. (2019). Método de polimorfismo de comprimento de fragmento de restrição de PCR amplamente aplicável para genotipagem do vírus da leucemia bovina. Journal of Veterinary Medical Science, 18, 0603.
Oliveira, A. J. (2021). A cultura do Carthamus tinctorius L.: Principais usos e variabilidade genética. Research, Society and Development, 10(2), e24810212683-e24810212683.
Paulino, P. P. S., Poletine, J. P., Brondani, S. T., Barelli, M. A. A., & da Silva, V. P. (2020). Mapeamento do gene de resistência ao Colletotrichum lindemuthianum na cultivar andina de feijão comum jalo pintado 2. Journal of Agronomic Sciences, 9, 81-107.
Pejic, I., Ajmone-Marsan, P., & Morgante, M. (1998) Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theoretical and Applied Genetics, (97), 1248-1255.
Pereira, A. S., Shitsuka, D. M., Parreira, F. J. & Shitsuka, R. (2018). Metodologia da Pesquisa Científica. UFSM NTE.
Rohit, A., Maiti, B., Shenoy, S., & Karunasagar, I. (2016). Polimorfismo de comprimento de fragmento de restrição de reação em cadeia da polimerase (PCR-RFLP) para diagnóstico rápido de sepse neonatal. The Indian Journal of Medical Research, 143(1), 72.
Saadaoui, E., Martín, J. J., Tlili, N., & Cervantes, E. (2017). Castor bean (Ricinus communis L.): Diversity, seed oil and uses. Oil Seed Crops: Yield and Adaptations under Environmental Stress, 19 - 33.
Sander, N. L., Tiago, A. V., de Arruda, J. C., Carniello, M. A., Silva, M. T. P., Rossi, A. A. B., & da Silva, C. J. (2017). Diversidade genética e estrutura populacional de Mauritia flexuosa L. f. no Cerrado e no Pantanal. Boletim do Museu Paraense Emílio Goeldi-Ciências Naturais, 12(2), 209-219.
Savelkoul, P. H. M., Aarts, H. J. M., & Haas, J. (1999) Amplified-Fragment Length Polymorphism Analysis: the State of an Art. Journal of Clinical Microbioloy, 37, 3083-3091.
Silva, L. P., Marostega, T. N., Gilio, T. A. S., Serafim, M. E., Araújo, K. L., & Neves, L. G. (2019). Transferibilidade de marcadores microssatélites para espécies silvestres de maracujazeiro. Revista de Ciências Agrárias Amazonian Journal of Agricultural and Environmental Sciences, 62.
Silveira, G. F., Souza Arenas, M. D., Varella, T. L., Schmitt, K. F. M., Lima, J. A., da Silva, B. M., & Rossi, A. A. B. (2020). Estrutura Populacional e Variabilidade Genética em Populações Nativas de Passiflora cristalina Vanderpl. & Zappi, em Fragmentos Florestais no estado de Mato Grosso. Brazilian Journal of Development, 6(11), 87328-87341.
Siqueira, J. F, Sakamoto, M., & Rosado, A. S. (2017). Perfil da comunidade microbiana usando polimorfismo de comprimento de fragmento de restrição terminal (T-RFLP) e eletroforese em gel de gradiente desnaturante (DGGE). Oral Biology, 139-152.
Vos, P., Hogers, R., & Bleeker, M. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research, 21, 4407-4414.
Wu, W. D., Liu, W. H., Sun, M., Zhou, J. Q., Liu, W., Zhang, C. L., & Ma, X. (2019). Genetic diversity and structure of Elymus tangutorum accessions from western China as unraveled by AFLP markers. Hereditas, 156(1), 1-13.
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Copyright (c) 2021 Altacis Junior Oliveira; Taniele Carvalho de Oliveira; Andressa Alves Cabreira dos Santos; Thalyson Ade Siqueira; Willian Martins Duarte; Daniela Soares Alves Caldeira; Marcella Karoline Cardoso Vilarinho; Mirian da Silva Almici; Gustavo Ferreira da Silva; Marco Antonio Aparecido Barelli; Isane Vera Karsburg
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