Change in soil microbial biodiversity due to agricultural cultivation: a review

Authors

DOI:

https://doi.org/10.33448/rsd-v11i15.37168

Keywords:

Bibliometric analysis; Community; Microorganisms.

Abstract

Agricultural soils tend to lose their quality according to their use, management and cultivation, especially in relation to the community of microorganisms present in the soil. In order to gather information on the alteration of soil microbial biodiversity due to agricultural cultivation, the objective of this bibliographic review was to use the Scopus database to verify the existing literature on the proposed theme and if there is any change according to its management. The search was carried out in the articles contained in the database, searching the title, abstract and keywords using four indexed terms: biodiversity, microbial, soil and agricultural. 891 articles were found and these were used for bibliometric analysis, for the writing of this article two filters were used: for open access articles and for the years 2017 to 2022, selecting 216 articles to be studied in this review. With the help of the statistical program R version 4.2.0, the bibliometric analysis was performed with the bibliometrix package. In the bibliometric analysis, it was possible to identify that articles related to the topic began to be published in 1992 with few publications, surpassing the mark of 25 articles published per year only in 2008, going from 75 articles published a year only in 2017 and since then. increased publication interest in the area. It was also possible to observe that the country that publishes the most on the subject is the United States and the word most cited in the titles of the articles is the bacteria microorganism. This review reveals that the change from a native system to agricultural cultivation, as well as the cultivated species, the microbial biodiversity of the soil changes.

References

Anggrainy, E. D. , Syarifain, R. I , Hidayat, A. , Solihatin, E., Suherman, C., Fitriatin, B. N. , Simarmata, T. (2020). Shifting of microbial biodiversity and soil health in rhizomicrobiome of natural forest and agricultural soil. Open Agriculture. 5: 936–942. https://doi.org/10.1515/opag-2020-0090

Cappelli, S. L., Domeignoz-Horta, L. A., Loaiza, V., Laine, A. L. (2022). Plant biodiversity promotes sustainable agriculture directly and via belowground effects Trends in Plant Science, 27 (7) 677. https://doi.org/10.1016/j.tplants.2022.02.003

Changey, F., Nunan, N., Herrmann, A. M., Lerch, T. Z. (2022). Catching change in microbial diversity indicators under different soil organic matter managements: Higher taxonomic resolution, better discrimination? Ecological Indicators 139 . https://doi.org/10.1016/j.ecolind.2022.108897.

Correia, A. M. R. & Mesquita, A. (2014.). Mestrados e Doutoramentos. Vida Econômica Editorial, (2a ed.) 328 p.

Cornell, C. R., Zhang, Y., Nind, D., Wu, L., Wagle, P., Steiner, J. L., Xiao, X. & Zhou, J. (2022). Temporal Dynamics of Bacterial Communities along a Gradient of Disturbance in a U.S. Southern Plains Agroecosystem. ASM Journal, mBio, 13 (3). https://doi.org/10.1128/mbio.03829-21

Costa, P.B., Benucci, G.M.N., Chou, M.-Y., Wyk, J. V., Chretien, M., Bonito, G. (2022). Soil Origin and Plant Genotype Modulate Switchgrass Aboveground Productivity and Root Microbiome Assembly. ASM Journals, mBio, 13(2). https://doi.org/10.1128/mbio.00079-22.

Duff, A.M., Forrestal, P., Ikoyi, I., Brennan, F. (2022). Assessing the long-term impact of urease and nitrification inhibitor use on microbial community composition, diversity and function in grassland soil. Soil Biology and Biochemistry. 170. https://doi.org/10.1016/j.soilbio.2022.108709

Fenster T. L. D, Oikawa P. Y. & Lundgren, J.G. (2021) Regenerative Almond Production Systems Improve Soil Health, Biodiversity, and Profit. Front. Sustain. Food Syst. 5:664359. doi: 10.3389/fsufs.2021.664359

Gillingham, M.D., Gomes, R.L., Ferrari, R., West, H.M. (2022). Sorption, separation and recycling of ammonium in agricultural soils: A viable application for magnetic biochar? Science of the Total Environment, 812. https://doi.org/10.1016/j.scitotenv.2021.151440

Gobbi, A., Acedo, A., Iman, N., Santini, R., Ortiz, R. A., Ellegaard-Jensen, L., Belda, I., Hansen, L. (2022). A global microbiome survey of vineyard soils highlights the microbial dimension of viticultural terroirs. Communications Biology. 5. 241. https://doi.org/10.1038/s42003-022-03202-5.

Imam, N., Belda I., García-Jiménez, B., Duehl A. J., Doroghazi, J. R., Almonacid, D. E., Thomas, V. P. & Acedo, A. 2021. Local network properties of soil and rhizosphere microbial communities in potato plantations treated with a biological product are important predictors of crop yield. mSphere 6. https://doi.org/10.1128/mSphere.00130-21.

Khan, A., Jiang, H., Bu, J., Adnan, M., Gillani, S. W. & Zhang, M. (2022). An insight to rhizosphere bacterial community composition and structure of consecutive winter-initiated sugarcane ratoon crop in Southern China. BMC Plant Biol 22, 74 . https://doi.org/10.1186/s12870-022-03463-6

Kim, H., Park, Y.-H., Yang, J.E., Kim, H.-S., Kim, S.-C., Oh, E.-J., Moon, J., Cho, W., Shin,W. & Yu, C. (2022). Analysis of Major Bacteria and Diversity of Surface Soil to Discover Biomarkers Related to Soil Health. Toxics, 10, 117. https://doi.org/10.3390/toxics10030117

Lopes, L. S,, Mendes, L.W., Antunes, J. E. L., Oliveira, L. M. S., Melo, V. M. M., Pereira, A. P. A., Costa, A., F. Oliveira, J. P., Martínez, C. R., Figueiredo, M. V. B. & Araújo, A. S. F. (2021). Estrutura e composição de comunidades bacterianas distintas em diferentes ecorregiões produtoras de feijão-caupi no Nordeste do Brasil. Sci Rep 11, 831. https://doi-org.ez181.periodicos.capes.gov.br/10.1038/s41598-020-80840-x

Mao, T. & Jiang, X. (2021). Changes in microbial community and enzyme activity in soil under continuous pepper cropping in response to Trichoderma hamatum MHT1134 application Scientifc Reports, 11:21585. https://doi.org/10.1038/s41598-021-00951-x

Navarro-Noya, Y. E., Chávez-Romero, Y., Lorenzana, A. S. L., Govaersts, B., Verhulst, N. & Dendooven, L. (2022). Bacterial Communities in the Rhizosphere at Different Growth Stages of Maize Cultivated in Soil Under Conventional and Conservation Agricultural Practices. 10 (2). https://doi.org/10.1128/spectrum.01834-21

Susanti, W. I. ,Bartels, T., Krashevska, V., Widyastuti, R., Deharveng, L., Scheu, S., & Potapov, A.(2021).A conversão da floresta tropical em plantações de dendezeiros e seringueiras afeta a composição funcional da serapilheira e do solo Collembola. Ecologia e Evolução, 11, 10686–10708. https://doi-org.ez181.periodicos.capes.gov.br/10.1002/ece3.7881

Vargas Hoyos H. A., Chiaramonte J. B., Barbosa-Casteliani A. G., Fernandez Morais J., Perez-Jaramillo J. E., Nobre Santos S., Nascimento Queiroz S. C. & Soares Melo I. (2021) An Actinobacterium Strain From Soil of Cerrado Promotes Phosphorus Solubilization and Plant Growth in Soybean Plants. Front. Bioeng. Biotechnol. 9:579906. doi: 10.3389/fbioe.2021.579906

Wang, F., Cui, H., He, F., Liu, Q., Zhu, Q., Wang, W., Liao, H., Yao, D., Cao, W. & Lu, P. (2022). The Green Manure (Astragalus sinicus L.) Improved Rice Yield and Quality and Changed Soil Microbial Communities of Rice in the Karst Mountains Area. Agronomy, 12, 1851. https:// doi.org/10.3390/agronomy12081851

Waymouth, V., Miller, R. E., Kasel, S., Ede, F., Bissett, A. & Aponte, C. (2021). Soil Bacterial Community Responds to Land-Use Change in Riparian Ecosystems. Forests, 12, 157. https://doi.org/10.3390/ f12020157

Wolińska, A., Górniak, D., Zielenkiewicz, U., Goryluk-Salmonowicz, A., Kuźniar, A., Stępniewska, Z. & Błaszczyk, M. (2017). Microbial biodiversity in arable soils is affected by agricultural practices. Int. Agrophys., 31, 259-271 doi: 10.1515/intag-2016-0040

Wolińska, A., Kruczy ´nska, A., Podlewski, J., Słomczewski, A., Grz ˛adziel, J., Gał ˛azka, A.& Ku ´zniar, A. (2022). Does the Use of an Intercropping Mixture Really Improve the Biology of Monocultural Soils? A Search for Bacterial Indicators of Sensitivity and Resistance to Long-Term Maize Monoculture. Agronomy, 12, 613. https://doi.org/10.3390/ agronomy12030613

Yang, B., Banerjee, S., Herzog, C., Ramirez, A. C., Dahlin, P. & Heijden, G. A. V. (2021). Impact of land use type and organic farming on the abundance, diversity, community composition and functional properties of soil nematode communities in vegetable farming. Agriculture, Ecosystems and Environment 318. https://doi.org/10.1016/j.agee.2021.107488

Zhao Y, Yan C, Hu F, Luo Z, Zhang S, Xiao M, Chen Z & Fan H (2022) Intercropping Pinto Peanut in Litchi Orchard Effectively Improved Soil Available Potassium Content, Optimized Soil Bacterial Community Structure, and Advanced Bacterial Community Diversity. Front. Microbiol. 13:868312. doi: 10.3389/fmicb.2022.868312

Published

21/11/2022

How to Cite

OLIVEIRA, K. C. L. de; SANTOS, T. de F. S. dos; ROSA, C. R. J. da; VIEIRA, R. da costa; RODRIGUES, D. de J.; GUEDES, S. F.; WEBER, O. L. dos S. . Change in soil microbial biodiversity due to agricultural cultivation: a review. Research, Society and Development, [S. l.], v. 11, n. 15, p. e396111537168, 2022. DOI: 10.33448/rsd-v11i15.37168. Disponível em: https://rsdjournal.org/index.php/rsd/article/view/37168. Acesso em: 31 jan. 2023.

Issue

Section

Review Article