The importance of keywords in Molecular Paleontology: exploring the Word Cloud resource for trends representation

Authors

DOI:

https://doi.org/10.33448/rsd-v11i16.37819

Keywords:

Text mining; Information and communication Technologies; Descriptors; Information retrieval; Research trends in geosciences.

Abstract

A lot can be at stake, depending on the choice of words used to describe an emerging science, because terminology affects the way knowledge is developed. Molecular Paleontology is one such area where a wide variety of terms and expressions are being used to refer to their research approaches and objects of study. Thus, this study sought to investigate the frequency of use of recurrent keywords in Molecular Paleontology papers, in order to provide a collection of potential terms that may be useful to guide the choice of descriptors. This is a research carried out with a qualitative-quantitative approach to data. The sample consisted of secondary data, from 4 literature review works, which previously surveyed the papers that claimed findings of paleomolecular traces in different taxonomic groups of vertebrates. Data collection took place through the individual search for keywords and the simple count of their occurrence in each of the analyzed papers. For content analysis, the Word Cloud (WC) graphic method was used from the Infogram platform. In general, 263 keywords were obtained from a total of 45 reviewed papers. Of these, 148 terms were retrieved from 24 papers on non-avian dinosaurs, 79 terms from 14 papers on Cenozoic mammals, 26 terms from 5 papers on Mesozoic birds, and 10 terms from 2 papers on the Pterosauria clade and other Mesozoic marine reptiles. It was observed that the mapping carried out with the support of the WC resource is useful for suggesting terms that can be used as keywords. Thus, this research made it possible, in a preliminary way, to identify terminological and research trends in the field of Molecular Paleontology.

Author Biographies

Everton Fernando Alves, PALEOMOL – Virtual Laboratory of Molecular Paleontology

Mestre em Imunogenética pela Universidade Estadual de Maringá (UEM)

Especialista em Paleontologia e Cultura pela Faculdade Futura.

Licenciado em Ciências Biológicas pela Universidade Santo Amaro (Unisa)

 

Weliton Augusto Gomes, PALEOMOL – Virtual Laboratory of Molecular Paleontology

Especialista em Bioética e ética aplicada pela Universidade de Caxias do Sul.

Licenciado em Ciências Biológicas pelo Centro Universitário Campos de Andrade (UNIANDRADE).

Thiago Somolinos Soldani, MicrA – Laboratory of Applied Micropaleontology

Graduado em Geologia pela Universidade Federal do Rio de Janeiro (UFRJ).

Marcio Fraiberg Machado, PALEOMOL – Virtual Laboratory of Molecular Paleontology

Doutor em Educação em Ciências e Matemática pela Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS)

Mestre em Educação em Ciências e Matemática pela PUCRS.

Bacharel/Licenciado em Ciências Biológicas pela Universidade do Oeste Paulista (UNOESTE)

Bacharel em Pedagogia pela Universidade de Franca (UNIFRAN)

References

Alves, E. F., & Machado, M. F. (2020). Perspectivas atuais sobre tecidos moles não mineralizados em fósseis de dinossauros não avianos. Terræ Didatica, 16, 1-14, e020028. https://doi.org/10.20396/td.v16i0.8659539

Alves, E. F., & Machado, M. F. (2021a). Preservação Excepcional de Biomateriais Não Mineralizados em Fósseis do Clado Avialae. Anuário do Instituto de Geociências, 44, e37908. https://doi.org/10.11137/1982-3908_2021_44_37908

Alves, E. F., & Machado, M. F. (2021b). Frequência de preservação de biomateriais não mineralizados no registro fóssil de répteis mesozoicos: uma abordagem sobre pterossauros e répteis marinhos. Brazilian Journal of Development, 7(5), 44797-44821. https://doi.org/10.34117/bjdv7n5-076

Alves, E. F., & Machado, M. F. (2021c). Proposta de Plano de Aula sobre Paleontologia Molecular para inserção em disciplina de Paleontologia de cursos de graduação em Ciências Biológicas. Pesquisa e Ensino em Ciências Exatas e da Natureza, 5, e1695. http://dx.doi.org/10.29215/pecen.v5i0.1695

Alves, E. F., Gomes, W. A., & Machado, M. F. (2021). Proposta de um Plano de Aula simplificado sobre Paleontologia Molecular para a inserção em disciplina de Biologia do Ensino Médio. Revista Brasileira do Ensino Médio, 4, 115-136. https://doi.org/10.5281/zenodo.5526955

Armitage, M., & Solliday, J. (2020). UV Autofluorescence Microscopy of Dinosaur Bone Reveals Encapsulation of Blood Clots within Vessel Canals. Microscopy Today, 28(5), 30–38. https://doi.org/10.1017/S1551929520001340

Bailleul, A. M., O'Connor, J., & Schweitzer, M. H. (2019). Dinosaur paleohistology: review, trends and new avenues of investigation. PeerJ, 7, e7764. https://doi.org/10.7717/peerj.7764

Cadena, E. (2016). Microscopical and elemental FESEM and Phenom ProX-SEM-EDS analysis of osteocyte-and blood vessel-like microstructures obtained from fossil vertebrates of the Eocene Messel Pit, Germany. PeerJ, 4, e1618. https://doi.org/10.7717/peerj.1618

Eitzel, M. V., Cappadonna, J. L., Santos-Lang, C., Duerr, R. E., Virapongse, A., West, S. E., et al. (2017). Citizen Science Terminology Matters: Exploring Key Terms. Citizen Science: Theory and Practice, 2(1), 1. http://doi.org/10.5334/cstp.96

Garcia, D. C. F., Gattaz, C. C., & Gattaz, N. C. (2019). A Relevância do Título, do Resumo e de Palavras-chave para a Escrita de Artigos Científicos. Revista de Administração Contemporânea, 23(3), 1-9. https://doi.org/10.1590/1982-7849rac2019190178.

Gazeta. (2005). Tecido macio de tiranossauro revela capacidade de conservação. Gazeta Brazilian News. https://www.gazetanews.com/tecido-macio-de-tiranossauro-revela-capacidade-de-conservacao/index.html

Gomes, W. A., Machado, M. F., & Alves, E. F. (2022). Preservação excepcional de biomateriais não mineralizados em fósseis cenozoicos do clado Mammalia. Research, Society and Development, 11(14), e533111436739. https://doi.org/10.33448/rsd-v11i14.36739

González, L-M., García-Massó, X., Pardo-Ibañez, A., Peset, F., & Devís-Devís, J. (2018). An author keyword analysis for mapping Sport Sciences. PLoS ONE, 13(8), e0201435. https://doi.org/10.1371/journal.pone.0201435

Hartley, J., & Kostoff, R. N. (2003). How useful are ‘keywords’ in scientific journals? Journal of Information Science, 29(5), 433–438. https://doi.org/10.1177/01655515030295008

Hohemberger, R., Góes Bilar, J., Schwanke, C., & Coutinho, R. X. (2021). O ensino de Paleontologia: interpretações de uma abordagem contextualizada à realidade local. Revista de Ensino de Ciências e Matemática, 12(1), 1-23. https://doi.org/10.26843/rencima.v12n1a19

Kalmukov, Y. (2021). Using word clouds for fast identification of papers’ subject domain and reviewers’ competences. In: Proceedings of University of Ruse, 60., Book 3.2., 2021, Ruse, Bulgária, pp. 114-119. https://arxiv.org/ftp/arxiv/papers/2112/2112.14861.pdf

Li, Z.-H., Bailleul, A. M., Stidham, T. A., Wang, M., & Deng, T. (2021). Exceptional preservation of an extinct ostrich from the Late Miocene Linxia Basin of China. Vertebrata PalAsiatica, 59(3), 229–244. https://doi.org/10.19615/j.cnki.1000-3118.210309

Lopes, R. J. (2009). Cientistas encontram 'carne' em fóssil de dinossauro da América do Norte. G1.com. https://g1.globo.com/Noticias/Ciencia/0,,MUL1104821-5603,00-CIENTISTAS+ENCONTRAM+CARNE+EM+FOSSIL+DE+DINOSSAURO+DA+AMERICA+DO+NORTE.html

Pan, Y. (2020). Molecular paleontology as an exciting, challenging and controversial field. National Science Review, 7(4), 823. https://doi.org/10.1093/nsr/nwaa001

Parry, L. A., Smithwick, F., Nordén, K. K., Saitta, E. T., Lozano-Fernandez, J., Tanner, A. R., Caron, J. B., Edgecombe, G. D., Briggs, D., & Vinther, J. (2018). Soft-Bodied Fossils Are Not Simply Rotten Carcasses - Toward a Holistic Understanding of Exceptional Fossil Preservation: Exceptional Fossil Preservation Is Complex and Involves the Interplay of Numerous Biological and Geological Processes. BioEssays: news and reviews in molecular, cellular and developmental biology, 40(1), 1700167. https://doi.org/10.1002/bies.201700167

Pawlicki, R. (1978). Morphological differentiation of the fossil dinosaur bone cells. Cells Tissues Organs, 100(4), 411-418. https://doi.org/10.1159/000144925

Pourret, O., Bollinger, J. C. & van Hullebusch, E. D. (2020). On the difficulties of being rigorous in environmental geochemistry studies: some recommendations for designing an impactful paper. Environmental Science and Pollution Research, 27, 1267–1275. https://doi.org/10.1007/s11356-019-06835-y

Ramírez-Montoya, M. S., Loaiza-Aguirre, M. I., Zúñiga-Ojeda, A., & Portuguez-Castro, M. (2021). Characterization of the Teaching Profile within the Framework of Education 4.0. Future Internet, 13(4), 91. https://doi.org/10.3390/fi13040091

Restrepo-Arango, C., & Cárdenas-Rozo, A. L. (2022). Análisis textual de artículos científicos publicados sobre fósiles colombianos. Encontros Bibli: Revista Eletrônica de Biblioteconomia e Ciência da Informação, 27, 1-25. https://doi.org/10.5007/1518-2924.2022.e83470

Santana, A., & Salcedo, D. (2022). O valor sociocientífico do Repositório Filatélico Brasileiro: um estudo conceitual. Revista Conhecimento em Ação, 7(1), 61-79. https://doi.org/10.47681/rca.v7i1.49057

Schroeter, E. R., Ullmann, P. V., Macauley, K., Ash, R. D., Zheng, W., Schweitzer, M. H., & Lacovara, K. J. (2022). Soft-Tissue, Rare Earth Element, and Molecular Analyses of Dreadnoughtus schrani, an Exceptionally Complete Titanosaur from Argentina. Biology, 11, 1158. https://doi.org/10.3390/biology11081158Acad

Schweitzer, M. H. (2003). Reviews and Previews: The Future of Molecular Biology. Palaeontologia Electronica, 5(2), 1–11. https://palaeo-electronica.org/2002_2/editor/r_and_p.pdf

Schweitzer, M. H. (2004). Molecular paleontology: some current advances and problems. Annales de Paléontologie, 90(2), 81–102. https://doi.org/10.1016/j.annpal.2004.02.001

SciELO Brasil. (2020). Critérios, política e procedimentos para a admissão e a permanência de periódicos científicos a Coleção SciELO Brasil [online]. https://wp.scielo.org/wp-content/uploads/20200500-Criterios-SciELO-Brasil.pdf

Senter, P. J. (2021). Preservation of Soft Tissues in Dinosaur Fossils: Compatibility with an Age of Millions of Years. American Biology Teacher, 83(5), 298-302. https://doi.org/10.1525/abt.2021.83.5.298

Silva, R. G. P. da., Castro, A. R. S. F. de., & Mansur, K. L. (2021). Percepção dos visitantes do Museu da Geodiversidade sobre o patrimônio geológico ex situ em exposição. Terræ Didatica, 17, 1-12, e021055. https://doi.org/10.20396/td.v17i00.8666422

Tahoun, M., Gee, C. T., Mccoy, V. E., Sander, P. M., & Müller, C. E. (2021). Chemistry of porphyrins in fossil plants and animals. RSC Advances, 11, 7552–7563. https://doi.org/10.1039/D0RA10688G

Tahoun, M., Engeser, M., Namasivayam, V., Sander, P. M., & Müller, C. E. (2022). Chemistry and Analysis of Organic Compounds in Dinosaurs. Biology, 11, 670. https://doi.org/10.3390/biology11050670

Tripathi, M., Kumar, S., Sonker, S. K., & Babbar, P. (2018). Occurrence of author keywords and keywords plus in social sciences and humanities research: A preliminary study. COLLNET Journal of Scientometrics and Information Management, 12(2), 215-232. https://doi.org/10.1080/09737766.2018.1436951

Uddin, S., & Khan, A. (2016). The impact of author – selected keywords on citation counts. Journal of Informetrics, 10(4), 1166–1177. https://doi.org/10.1016/j.joi.2016.10.004

Ullmann, P. V., Pandya, S. H., & Nellermoe, R. (2019). Patterns of soft tissue and cellular preservation in relation to fossil bone tissue structure and overburden depth at the standing rock hadrosaur site, Maastrichtian hell creek formation, South Dakota, USA. Cretaceous Research, 99, 1-13. https://doi.org/10.1016/j.cretres.2019.02.012

Ullmann, P. V., Macauley, K., Ash, R. D., Shoup, B., & Scannella, J. B. (2021). Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR1125. Biology, 10, 1193. https://doi.org/10.3390/biology10111193

Ullmann, P. V., Ash, R. D., & Scannella, J. B. (2022). Taphonomic and Diagenetic Pathways to Protein Preservation, Part II: The Case of Brachylophosaurus canadensis Specimen MOR 2598. Biology, 11, 1177. https://doi.org/10.3390/biology11081177

Vasconcellos Júnior, A. de S. (2011). Uma análise lakatosiana da pesquisa de Mary Schweitzer em biologia evolutiva. 43 f. TCC (Licenciatura em Filosofia) — Universidade de Brasília, Brasília. http://dx.doi.org/10.26512/2011.TCC.2873

Voegele, K. K., Boles, Z. M., Ullmann, P. V., Schroeter, E. R., Zheng, W., & Lacovara, K. J. (2022). Soft Tissue and Biomolecular Preservation in Vertebrate Fossils from Glauconitic, Shallow Marine Sediments of the Hornerstown Formation, Edelman Fossil Park, New Jersey. Biology, 11, 1161. https://doi.org/10.3390/biology11081161

Published

28/11/2022

How to Cite

ALVES, E. F.; GOMES, W. A.; SOLDANI, T. S. .; MACHADO, M. F. . The importance of keywords in Molecular Paleontology: exploring the Word Cloud resource for trends representation. Research, Society and Development, [S. l.], v. 11, n. 16, p. e06111637819, 2022. DOI: 10.33448/rsd-v11i16.37819. Disponível em: https://rsdjournal.org/index.php/rsd/article/view/37819. Acesso em: 20 apr. 2024.

Issue

Section

Exact and Earth Sciences